Filed under: Tools
Status: In production
CATNAP (Coregistration, Adjustment, and Tensor-solving – a Nicely Automated Program) is an end-to-end data processing pipeline for Philips PAR/REC Magnetic Resonance data files.
Features:
- Performs motion correction for both diffusion and structural images using FSL FLIRT.
- Adjusts the diffusion gradient directions for scanner settings (i.e., slice angulation, slice orientation, etc.) and motion correction (i.e., the rotational component of the applied transformation).
- Computes tensor and derived quantities (FA, MD, colormaps, eigenvalues etc).
- Results are readily compatible with DTIStudio, FSL, and other tensor analysis packages.
For more information: http://iacl.ece.jhu.edu/%7Ebennett/catnap/catnap.shtml
